Guide | Pharmacist locums
Locum pharmacist tax and expenses: a UK guide for 2026/27
A self-employed locum pharmacist pays Income Tax and Class 4 National Insurance on profit through Self Assessment, after deducting allowable expenses such as the GPhC registration fee, indemnity cover, business mileage at 55p a mile for the first 10,000 miles in 2026/27, and training that keeps your skills current. Agency work through PAYE is taxed at source instead, and a limited company pays Corporation Tax on its own profit.
Once your yearly bill reaches £1,000, HMRC usually also asks for payments on account, half of last year's bill each 31 January and 31 July, unless more than 80% of your tax was already collected through payroll. This guide sets out each part with the official source.
Checked on against the primary sources listed at the end of this page.
Self-employed, agency or limited company: how is each taxed?
Most locum pharmacists work in one or more of three ways, and the tax follows the arrangement for each engagement:
| Way of working | How it is taxed | Expenses |
|---|---|---|
| Self-employed (invoicing pharmacies directly) | Income Tax and Class 4 National Insurance on profit, through Self Assessment. In 2026/27, Class 4 is 6% on profit between £12,570.00 and £50,270.00 and 2% above. | Allowable business expenses come off your income before tax. |
| Agency, on PAYE or through an umbrella company | Tax and National Insurance are deducted through payroll, as employment income. | Narrower employee rules; you can still claim relief on required professional fees such as the GPhC fee. |
| Your own limited company | The company pays Corporation Tax on its profit (19% up to £50,000.00, 25% above £250,000.00, with marginal relief between; both limits are lower for a short accounting period or associated companies), and you pay tax on what you draw as salary or dividends. | The company claims its own costs. IR35 can apply to each engagement. |
If you are new to self-employment, tell HMRC by 5 October after the end of the tax year you started in. If you are weighing a company, read IR35 for locums first and take advice before you set one up.
What expenses can a self-employed locum pharmacist claim?
GOV.UK's list of allowable expenses applies to pharmacists as to any sole trader. The ones that matter most for locum work:
- GPhC registration. The annual fee you must pay to stay on the register and practise.
- Indemnity cover. Article 32 of the Pharmacy Order 2010 requires every practising pharmacist to have an indemnity arrangement providing appropriate cover, and professional indemnity insurance premiums are allowable.
- Professional memberships and journals. Professional organisation membership related to your business and professional journals are allowable.
- Training. Courses that improve skills you already use or keep you up to date with your field. Training to move into an unrelated area is not.
- Business travel. Mileage at the HMRC flat rate, or actual costs, plus parking and public transport for business journeys (see below).
- Phone, equipment and software. The business share of phone and internet bills; equipment such as a laptop as an expense on the cash basis or a capital allowance on traditional accounting.
- Working from home. Time spent on invoices and bookings at home can use the simplified flat rate: £10 a month for 25 to 50 hours, £18 for 51 to 100, £26 for 101 or more.
- Accountancy and bank charges. Accountants hired for business reasons and bank charges are allowable; GOV.UK lists the cost of preparing your Self Assessment return itself as not allowable.
- Clothing. A uniform or protective clothing only. Everyday clothes are not allowable, even if you only wear them to work.
If you claim the £1,000 trading allowance instead, you cannot claim any of these.
What are the HMRC mileage rates for 2026/27?
The simplified expenses flat rates rose for cars and vans from 6 April 2026. The rate follows the date of the journey, so 2025/26 journeys stay at the old rate:
| Vehicle | From 6 April 2026 | Before 6 April 2026 |
|---|---|---|
| Car or van, first 10,000 business miles | 55p | 45p |
| Car or van, after 10,000 miles | 25p | 25p |
| Motorcycle | 24p | 24p |
The flat rate covers fuel, insurance, servicing and wear, so you cannot add fuel receipts on top. Once you use the flat rate for a vehicle, you must keep using it for that vehicle. Which journeys count is the harder question: HMRC looks at the purpose of each journey and the kind of business you run, and HMRC's BIM37600 and the pages after it set out when travel from home, to a regular pharmacy or between sites counts. Our HMRC mileage calculator applies the rates for you.
What if I work through an agency on PAYE?
Employment income uses narrower rules than self-employment, so the list above does not carry across. One relief does: employees can claim tax relief on professional fees they must pay to do the job and on subscriptions to bodies on HMRC's approved list. The General Pharmaceutical Council is on List 3. You can claim for the current tax year and the 4 before it, through your tax return if you file one. If you mix agency shifts with self-employed work, keep the two sets of income and costs separate.
How do payments on account work for a locum pharmacist?
Payments on account are advance payments towards next year's bill. Each is half of last year's tax, due by midnight on 31 January and 31 July. You do not make them if last year's bill was under £1,000, or if more than 80% of your tax was paid outside Self Assessment.
The first year catches people out. Say your first Self Assessment bill is £6,000.00. On 31 January you pay that £6,000.00 and, at the same time, a first payment on account of £3,000.00 towards the following year, then another £3,000.00 on 31 July. Setting aside a share of every invoice as you are paid is what makes those dates manageable.
What records should a locum pharmacist keep?
- Every invoice you send, and when each was paid.
- Receipts for each expense, including GPhC and indemnity renewals.
- A mileage log: date, start and end, miles, and the business reason for each journey.
- Agency payslips and P60s for any PAYE work.
Keep them for at least 5 years after the 31 January deadline for the tax year. Making Tax Digital for Income Tax also brings digital records and quarterly updates for sole traders whose qualifying income was over £50,000 in 2024/25 (from 6 April 2026), over £30,000 in 2025/26 (from 6 April 2027), and over £20,000 in 2026/27 (from 6 April 2028).
Reference notes | Questions
Frequently asked questions
Is a locum pharmacist self-employed?
It depends on how you are engaged. A pharmacist who invoices pharmacies directly for shifts is usually self-employed and pays tax through Self Assessment. Work through an agency on PAYE or an umbrella company is taxed through payroll as employment. Some locums trade through their own limited company. Your tax position follows the arrangement, not the job title.
Can a locum pharmacist claim the GPhC fee?
Yes. If you are self-employed, a registration fee you must pay to practise as a pharmacist is a cost of your locum business. If you are employed, the General Pharmaceutical Council is on HMRC's List 3 of approved bodies, and employees can claim relief on professional fees they must pay to do the job, for the current tax year and the 4 before it.
Is indemnity insurance tax deductible for a locum pharmacist?
For a self-employed locum, yes: GOV.UK lists professional indemnity insurance premiums as an allowable expense. The Pharmacy Order 2010 requires every practising pharmacist to have an indemnity arrangement providing appropriate cover, so this is a cost most locums carry.
What mileage rate can a locum pharmacist claim in 2026/27?
For a car or van, 55p a mile for the first 10,000 business miles in the tax year and 25p after that, for journeys from 6 April 2026. Journeys before then were 45p and 25p. Motorcycles are 24p a mile. Once you use the flat rate for a vehicle, you keep using it for as long as that vehicle is used in the business.
What are payments on account?
Advance payments towards your next Self Assessment bill. Each is half of last year's tax, due by 31 January and 31 July. You do not make them if last year's bill was under £1,000 or if more than 80% of your tax was paid outside Self Assessment, for example through PAYE.
Can I claim travel from home to the pharmacy?
Sometimes. For the self-employed, HMRC looks at why the journey was made and the kind of business you run, not just how often you go somewhere. If you work from a base at home and move between different pharmacies as a matter of course, journeys from that base can be business travel. If you work at one pharmacy on a regular pattern, it can count as your place of business and the journey there as commuting. Travel between two pharmacies on the same working day is usually business travel. HMRC's Business Income Manual from BIM37600, including BIM37620 and BIM37635, sets out the tests; an accountant can apply them to your pattern of work.
Keep shifts, invoices and mileage in one place
Sessional logs your shifts, turns them into invoices, and on Plus and Pro records expenses and mileage at the HMRC rate for the journey's tax year, with a tax reserve worked out from what you have earned. Basic is free with no card.
Sources
Each source below was read on unless it says otherwise. Rules and rates change: check the source before you rely on a figure, and tell us if something here is out of date.
- GOV.UK, expenses if you're self-employed: that allowable expenses are deducted to work out taxable profit, and that using the £1,000 trading allowance rules out claiming expenses
- GOV.UK, expenses if you're self-employed: subscriptions: professional journals and professional organisation membership related to the business are allowable; gym membership, political payments and charity donations are not
- GOV.UK, expenses if you're self-employed: legal and financial costs: professional indemnity insurance premiums, accountants hired for business reasons and bank charges are allowable; the cost of preparing your Self Assessment return is not
- GOV.UK, expenses if you're self-employed: training courses: training that improves skills you already use or keeps you up to date is allowable; training to start a new business or move into an unrelated area is not
- GOV.UK, expenses if you're self-employed: office, property and equipment: phone and internet bills (business use only), and that equipment such as computers is an allowable expense on the cash basis or a capital allowance on traditional accounting
- GOV.UK, expenses if you're self-employed: clothing: protective clothing and uniforms that are not everyday clothing are allowable; everyday clothing is not, even when worn for work
- GOV.UK, simplified expenses: working from home: the flat rates of £10, £18 and £26 a month for 25 to 50, 51 to 100 and 101 or more hours of business use, which exclude phone and internet
- GOV.UK, simplified expenses: vehicles: the 2026/27 flat rates per mile (55p then 25p for cars and goods vehicles, 24p for motorcycles), 45p before 6 April 2026, and that once you use flat rates for a vehicle you keep using them
- HMRC Business Income Manual, BIM37600: travel expenses: HMRC's approach to which journeys are business travel and which are ordinary commuting for the self-employed
- The Health Care and Associated Professions (Indemnity Arrangements) Order 2014, Schedule 1 Part 8 (article 32 of the Pharmacy Order 2010): that a registrant who practises as a pharmacist must have in force an indemnity arrangement providing appropriate cover
- GOV.UK, claim tax relief for your job expenses: professional fees and subscriptions: that employees can claim relief on fees they must pay to do the job and on subscriptions to HMRC-approved bodies, for the current and 4 previous tax years, through Self Assessment if they file a return
- HMRC, approved professional organisations and learned societies (List 3): that the General Pharmaceutical Council and the General Medical Council are on the list, and that the BMA entry restricts relief to 85% of the subscription
- GOV.UK, understand your Self Assessment tax bill: payments on account: that each payment is half of last year's tax, due by 31 January and 31 July, and the two cases where you do not make them (under £1,000, or more than 80% paid outside Self Assessment)
- GOV.UK, register for Self Assessment: that a new filer tells HMRC by 5 October after the end of the tax year (5 October 2026 for 2025/26)
- GOV.UK, business records if you're self-employed: how long to keep your records: that records are kept for at least 5 years after the 31 January submission deadline of the tax year they relate to
- GOV.UK, check if you're eligible for Making Tax Digital for Income Tax: the thresholds and start dates: over £50,000 in 2024/25 from 6 April 2026, over £30,000 in 2025/26 from 6 April 2027, over £20,000 in 2026/27 from 6 April 2028
Class 4 National Insurance and Corporation Tax figures are the 2026/27 rates held in Sessional's tax engine, which was checked against GOV.UK when the tax year began.
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